If you previously used a Microcal VP-ITC for binding studies, you can perform the same experiments on a MicroCal PEAQ-ITC. Use the experimental design wizard with the PEAQ-ITC software to predict ITC results with known parameters, and look at different concentrations and injection conditions.
Please login or register for free to read more.
If you previously used a Microcal VP-ITC for binding studies, you can perform the same experiments on a MicroCal PEAQ-ITC. Use the experimental design wizard with the PEAQ-ITC software to predict ITC results with known parameters, and look at different concentrations and injection conditions.
Setting | VP-ITC | PEAQ-ITC |
---|---|---|
Temperature setting | 2-80 °C. Most experiments performed between 10-37 °C | 2-80 °C. Most experiments performed between 10-37 °C |
Reference power | 10-30 µcal/sec | 3-10 µcal/sec |
Stirring speed | Approx. 300 rpm | Recommended 750 rpm |
Cell volume / volume needed to fill cell | 1.4 ml/2 ml | 200 µL/300 µL |
Injection Syringe volume / volume needed to fill syringe | 300 µL/500 µL | 40 µL/75 µL |
Range of injection volume | 5-15 µL | 1-3 µL |
Typical injection conditions | 1st injection 2 µL
Injections 2-58: 5 µL OR injections 2-29: 10 µL OR injections 2-19: 15 µL | 1st injection 0.4 µL
Injections 2-39: 1 µL OR injections 2-19: 2 µL OR injections 2-13: 3 µL |
Feedback | High | High |
Filter period | 2 sec | NA |
Table 1: Comparison of recommended ITC settings
Figure 1: PEAQ-ITC experiment simulator
Sample concentration depends on the binding affinity and the C parameter.
Assuming N = 1: C value = [Concentration in ITC cell]/KD
For PEAQ-ITC, the minimum recommended concentration is 5-10 µM. For large heat change and/or tight binding, you can reduce the concentration to 1-5 µM. Weak binding and/or low heat changes need higher sample concentrations.
For 1:1 binding, use 10X the concentration in the ITC cell.
Since the PEAQ-ITC cell is smaller, a binding experiment in the PEAQ-ITC produces less heat change/injection and total heat change, compared to same titration performed with a VP-ITC. In many cases, the fit binding curve produces similar KD and ΔH results with both instruments (see figure 2 and table 2 below).
NOTE: It has been observed that if the ΔH is low, you may need higher sample concentration in the PEAQ-ITC, compared to the VP-ITC to achieve high-quality results.
Figure 2: Left: PEAQ-ITC experiment with 0.1 mM EDTA in cell, 1 mM CaCl2 in syringe. Injection 1 0.4 µL. Injections 2-20 2 µL. N=1.01, KD 573 nM, ΔH -3.91 kcal/mole. Heat change for injection 2: -7.9 µcal. Total heat change: -78.2 µcal. Right: VP-ITC experiment with 0.1 mM EDTA in cell, 1 mM CaCl2 in syringe. Injection 1 2 µL. Injections 2-29 10 µL. N=1.03, KD 563 nM, ΔH -4.14 kcal/mole. Heat change for injection 2: -40.5 µcal. Total heat change: -562 µcal
Heat change | VP-ITC | PEAQ-ITC |
---|---|---|
Integrated Injection heat for 2nd injection (first full injection) | More than 10 µcal is ideal (minimum 5 µcal) | More than 2.5 µcal is ideal (minimum 1 µcal) |
Total heat change for all injections | More than 80 µcal – below this value data can be noisier and result in less reliable fits | More than 16 µcal – below this value data can be noisier and result in less reliable fits |
Table 2: Heat change guidelines for high-quality ITC data
For more guidelines on designing ITC experiments, please take a look at the resources below.